Table 3

Genera comparison (mean % relative abundance) between cystic fibrosis (CF) and primary ciliary dyskinesia (PCD) for all samples at all timepoints

GenusCF (%)PCD (%)P valueAdjusted p value
Streptococcus5531.3<0.0001<0.0001
Haemophilus3.220.5<0.0001<0.0001
Pseudomonas8.11.20.00010.012
Veillonella8.110.40.018NS
Granulicatella4.240.771NS
Gemella4.22.80.039NS
Neisseria3.86.30.004NS
Prevotella3.35.20.016NS
Rothia1.50.60.128NS
Staphylococcus1.1<0.10.015NS
Fusobacterium1.12.30.003NS
Moraxella0.53.30.044NS
  • Multiple t-tests with a Bonferroni correction were used to test differences in relative abundance of genera between CF and PCD. NS—non-significant (p>0.05).